Remote Otter LogoRemoteOtter

Machine Learning Engineer - Remote

Posted Yesterday
Software Development
Full Time
Worldwide

Overview

Join our team and help build the world's first biological reasoning model. Work with us to build generative foundational models that decode biological systems across scales - from molecules to organisms - enabling us to predict, understand, and program living systems in ways never before possible.

In Short

  • You will build foundational models for biology capable of reading and writing biology at scale.
  • You will develop deep generative models for biological applications, exploring innovative architectures to capture the complexities of multi-scale biological systems.
  • You will work on distributed training systems to scale our models to billions of parameters, optimizing for performance and efficiency across multi-GPU and multi-node setups while handling large-scale biological datasets.
  • You will engineer efficient data pipelines to manage and process massive biological datasets, addressing challenges in data loading, splitting, and memory optimization.
  • You will develop and implement robust evaluation frameworks for complex biological models, ensuring data integrity and preventing leakage across dataset splits.

Requirements

  • You have a Bachelor's in Computer Science, Machine Learning, or a related technical field.
  • You have 3+ years of experience in developing and implementing deep generative learning models.
  • You have experience pre-training models and are proficient in distributed computing environments.
  • You are proficient in Python and have expertise in at least one major deep learning framework (PyTorch, TensorFlow, or JAX).
  • You have experience with deep learning and generative architectures such as transformers, diffusion models and autoencoders.
  • You are skilled in working with terra-scale datasets and scaling models to billions of parameters.
  • You have a strong understanding of machine learning fundamentals, including various model architectures, optimization techniques, and evaluation metrics.
  • You have experience in designing and implementing efficient data pipelines for processing and managing large datasets.
  • You are experienced in developing robust evaluation frameworks and ensuring data integrity in machine learning projects.
  • You are experienced in code organization, version control, and collaborative software development practices.

Benefits

  • We encourage new and different ideas, creativity and contrarian thinking.
  • You own your day-to-day management. What we care about is that we all hit our milestones.
  • Competitive salary and equity in a growing, well-funded startup.
  • Excellent medical, dental, and vision coverage.
  • Healthy feedback focused environment to help you strive - leadership will have high expectations, regularly share constructive feedback, support you and help you grow, and welcome receiving feedback and ideas from you.
  • We are looking forward to further shaping our culture with early team members. You'll have a chance to make your mark!
Output Biosciences logo

Output Biosciences

Output Biosciences is an innovative biotech startup focused on developing the world's first biological reasoning model. The company aims to create generative foundational models that decode biological systems, enabling unprecedented predictions and programming of living systems. Operated by a team of experienced founders and biotech veterans, Output is backed by top-tier venture capital firms, including Y Combinator. The company is dedicated to transforming the landscape of medicine through advanced AI systems and is committed to making a tangible impact on millions of lives by pushing the boundaries of AI in biology.

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